Gene therapies for lysosomal disorders
Inventors
Abeliovich, Asa • Heckman, Laura • RHINN, Herve
Assignees
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Abstract
The disclosure relates, in some aspects, to compositions and methods for treatment of diseases associated with aberrant lysosomal function, for example Parkinson's disease and Gaucher disease. In some embodiments, the disclosure provides expression constructs comprising a transgene encoding beta-Glucocerebrosidase (GBA) or a portion thereof, Lysosomal Membrane Protein 2 (LIMP2), Prosaposin, or any combination of the foregoing. In some embodiments, the disclosure provides methods of Parkinson's disease by administering such expression constructs to a subject in need thereof.
Core Innovation
The disclosed invention relates to gene-therapy compositions and methods for lysosomal disorders, including Gaucher disease, and for Parkinson’s disease associated with GBA1-related mechanisms. The approach uses AAV-based expression constructs encoding a lysosomal Gcase protein, with the transgene insert encoding a Gcase protein comprising the nucleotide sequence of SEQ ID NO: 15, and with an expression construct flanked by two AAV inverted terminal repeat (ITR) sequences.
The constructs are further defined by the arrangement and selection of regulatory elements, including a promoter operably linked to the transgene insert, and optionally including enhancers and RNA regulatory elements. In representative configurations, the nucleic acid includes a CMVe enhancer, a CBA promoter, WPRE, and a bovine growth hormone polyA signal tail, with specific ordering in 5′ to 3′ order together with 5′ and 3′ AAV ITR sequences.
A key design aspect described in the document is the modified AAV ITR “D” region placement/sequence compared to wild-type AAV ITRs, including references to a wild-type AAV2 ITR (SEQ ID NO: 29) and a modified “D” region (SEQ ID NOs: 26 and 27). The document also describes inclusion of a TRY region (SEQ ID NO: 28) positioned between the 5′ ITR and the expression construct in certain construct architectures, and relates these construct features to nonclinical characterization in lysosomal and Parkinson-relevant models.
Claims Coverage
The independent claims in the provided set cover nucleic acid expression constructs and associated delivery/production components for AAV-mediated expression of a Gcase (beta-glucocerebrosidase) transgene defined by SEQ ID NO: 15. The inventive features are expressed through constraints on the transgene sequence, the promoter-transgene operable linkage, and the specific flanking AAV ITR arrangement, with additional independent claims directed to plasmid, baculovirus, isolated cells/vector-production systems, and rAAV vectors.
A promoter operably linked to a Gcase transgene flanked by AAV ITRs with defined 5′ and 3′ ITR identity
An isolated nucleic acid comprising an expression construct with a promoter operably linked to a transgene insert encoding a beta-glucocerebrosidase (Gcase) protein, wherein the transgene insert comprises the nucleotide sequence of SEQ ID NO: 15, and wherein two AAV inverted terminal repeat (ITR) sequences flank the expression construct, with a first 5′ ITR and a second 3′ ITR.
Ordered CMVe, CBA promoter, WPRE, and bovine growth hormone polyA with AAV ITRs around the Gcase transgene
An isolated nucleic acid comprising, in 5′ to 3′ order: a 5′ AAV ITR; a CMVe; a CBA promoter; a transgene insert encoding a Gcase protein comprising the nucleotide sequence of SEQ ID NO: 15; a WPRE; a Bovine Growth Hormone polyA signal tail; and a 3′ AAV ITR.
A plasmid carrying an AAV ITR-flanked Gcase expression construct
A plasmid comprising a nucleic acid comprising an expression construct with a promoter operably linked to a transgene insert encoding a Gcase protein, wherein the transgene insert comprises the nucleotide sequence of SEQ ID NO: 15, and wherein the expression construct is flanked by two AAV ITR sequences.
A baculovirus vector carrying an AAV ITR-flanked Gcase expression construct
A Baculovirus vector comprising a nucleic acid comprising an expression construct with a promoter operably linked to a transgene insert encoding a Gcase protein, wherein the transgene insert comprises the nucleotide sequence of SEQ ID NO: 15, and wherein the expression construct is flanked by two AAV ITR sequences.
An isolated cell containing AAV rep/cap vector and an ITR-flanked Gcase expression vector
An isolated cell comprising: (i) a first vector encoding one or more AAV rep proteins and/or one or more AAV cap proteins; and (ii) a second vector comprising a nucleic acid comprising an expression construct with a promoter operably linked to a transgene insert encoding a Gcase protein wherein the transgene insert comprises the nucleotide sequence of SEQ ID NO: 15, and wherein the expression construct is flanked by two AAV ITR sequences.
An rAAV vector encoding a SEQ ID NO: 15 Gcase transgene expression construct
A rAAV vector comprising a nucleic acid comprising an expression construct comprising a promoter operably linked to a transgene insert encoding a Gcase protein, wherein the transgene insert is SEQ ID NO: 15.
Overall, the claim coverage centers on AAV ITR-flanked expression constructs encoding a Gcase transgene defined by SEQ ID NO: 15, with independent claims spanning isolated nucleic acids with defined ITR and regulatory element content/order, and extending to plasmid, baculovirus vector, two-vector isolated cell systems for AAV packaging, and rAAV vectors carrying the SEQ ID NO: 15 Gcase expression construct.
Stated Advantages
Documented Applications
Gene-therapy compositions and treatment methods for lysosomal disorders, including Gaucher disease.
Gene-therapy compositions and treatment methods for Parkinson’s disease linked to GBA1-related mechanisms.
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