Methods of treating disorders associated with excess or unwanted killer cell lectin-like receptor subfamily g member 1 (KLRG1) expressing t cells with KLRG1 depleting antibodies

Inventors

Gulla, Stefano VincenzoThompson, Kenneth Evan

Assignees

Abcuro Inc

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Publication Number

US-12139541-B2

Patent

Publication Date

2024-11-12

Expiration Date


Abstract

The receptor killer cell lectin-like receptor G1 (KLRG1) is expressed on T and NK cells, which binds to ligands on epithelial and mesenchymal cells. The ligand for KLRG1 has been described to be E-cadherin, N-cadherin, and R-cadherin. The present disclosure relates to and results from the discovery and characterization of antibodies that bind the extracellular domain (ECD) of KLRG1 but do not interfere with its interaction with the ligands E-cadherin, N-cadherin, and R-cadherin. The antibodies described have been derived by mouse hybridoma technology, and can be humanized by grafting their complementary determining regions (CDRs) into a human framework. The antibodies described can be used as effective therapeutic agents. Various antibodies, or antigen-binding fragments of such antibodies, along with various therapeutic and/or diagnostic methods, among other features, are provided for in the present disclosure.

Core Innovation

Killer cell lectin-like receptor G1 (KLRG1) is described as a binding cadherin ligand that binds E-cadherin, N-cadherin, or R-cadherin to the extracellular domain of KLRG1. The disclosed antibodies specifically bind an extracellular domain of KLRG1 and do not interfere with binding by E-cadherin, N-cadherin, or R-cadherin to the extracellular domain of KLRG1.

The document discloses non-interfering anti-KLRG1 antibodies and antigen-binding fragments that bind the KLRG1 extracellular domain but do not compete with cadherin binding. Delivery is described as depleting excess or unwanted KLRG1-expressing T cells, and in some contexts KLRG1-expressing pathogenic T cells and/or NK cells attacking self-tissues or transplanted tissues.

The antibodies are defined by heavy chain and light chain variable regions comprising three heavy chain complementarity determining regions and three light chain complementarity determining regions. The document provides multiple enumerated combinations of SEQ ID NOs for the CDRs, and describes an epitope mapping to PLNFSRI distinct from the cadherin interface, with stated binding and functional distinctions including blocking versus non-blocking behavior.

Therapeutic use is described for disorders associated with excess or unwanted KLRG1 expressing T cells, including cancer and adjunct therapy in subjects undergoing checkpoint therapy, as well as autoimmune disease and transplant disorders. The document further describes pharmaceutical compositions and kits comprising the antibodies or fragments, and describes antibody humanization using mouse hybridomas and variable region specifications based on SEQ ID NOs and CDR sets.

Claims Coverage

The provided claims include four independent claims covering treatment of disorders associated with excess or unwanted KLRG1-expressing T cells, treatment of cancer comprising cancer cells that express KLRG1, adjunct therapy for cancer during checkpoint therapy, and depletion of KLRG1-expressing cells in a mixed population. Across these independent claims, the inventive features are centered on delivering a therapeutically effective amount of an anti-KLRG1 antibody that binds the KLRG1 extracellular domain without interfering with cadherin binding, with antibody variable regions defined by enumerated CDR sets using SEQ ID NOs.

Non-interfering extracellular domain binding to KLRG1 for depletion

Delivering a therapeutically effective amount of an antibody, or a fragment thereof, that specifically binds an extracellular domain of KLRG1 without interfering with binding by E-cadherin, N-cadherin, or R-cadherin to the extracellular domain of KLRG1, wherein delivery depletes the excess or unwanted KLRG1 expressing T cells in the subject.

KLRG1-targeted cancer depletion without cadherin interference

Treating cancer in a subject by delivering a therapeutically effective amount of an antibody, or a fragment thereof, that specifically binds an extracellular domain of KLRG1 without interfering with binding by E-cadherin, N-cadherin, or R-cadherin to the extracellular domain of KLRG1, wherein delivery depletes the cancer cells expressing KLRG1.

Adjunct anti-KLRG1 therapy during checkpoint therapy

Adjunct therapy for treatment of cancer in a subject undergoing checkpoint therapy, comprising delivering a therapeutically effective amount of an antibody, or a fragment thereof, that specifically binds an extracellular domain of KLRG1 without interfering with binding by E-cadherin, N-cadherin, or R-cadherin to the extracellular domain of KLRG1, wherein delivery depletes KLRG1 expressing pathogenic T cells and/or NK cells attacking self-tissues.

Depletion of KLRG1-expressing cells in a mixed population

Depleting KLRG1 expressing cells in a mixed population of cells by delivering an effective amount of an antibody, or a fragment thereof, that specifically binds KLRG1 and depletes KLRG1 expressing T cells and/or NK cells and/or cancer cells in the mixed population of cells.

Enumerated heavy-chain and light-chain CDR variable region sets by SEQ ID NOs

The antibody, or fragment thereof, comprises a heavy chain variable region comprising three heavy chain complementarity determining regions and a light chain variable region comprising three light chain complementarity determining regions comprising one of multiple enumerated combinations of SEQ ID NOs for the CDRs.

Across the independent claims, the scope is directed to anti-KLRG1 antibodies that bind the KLRG1 extracellular domain without interfering with cadherin binding, and that achieve depletion of KLRG1-expressing cells in treatment settings for disorders associated with excess or unwanted KLRG1-expressing T cells, cancer, and adjunct checkpoint therapy. The antibody is further restricted by heavy- and light-chain variable regions containing enumerated CDR sets defined by SEQ ID NO combinations.

Stated Advantages

Depletes excess or unwanted KLRG1 expressing T cells without interfering with KLRG1-mediated binding by E-cadherin, N-cadherin, or R-cadherin.

Depletes cancer cells expressing KLRG1.

Provides adjunct therapy for cancer in subjects undergoing checkpoint therapy by depleting KLRG1 expressing pathogenic T cells and/or NK cells.

Depletes KLRG1 expressing T cells and/or NK cells and/or cancer cells in a mixed population of cells.

Documented Applications

Treating a disorder associated with excess or unwanted KLRG1 expressing T cells in a subject.

Treating cancer in a subject, where the cancer comprises cancer cells that express KLRG1.

Adjunct therapy for treatment of cancer in a subject undergoing checkpoint therapy, where the cancer expresses KLRG1.

Depleting KLRG1 expressing cells in a mixed population of cells comprising one or more cells selected from T cells, NK cells, and cancer cells.

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