Antibacterial composition effective in treating gram negative bacterial infections and method for preparing the same

Inventors

Yoon, Seong JunJUN, Soo YounPARK, Jeong WonKim, Ji HyunKIM, Saet ByeolKang, Sang Hyeon

Assignees

Intron Biotechnology Inc

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Publication Number

US-11452757-B2

Patent

Publication Date

2022-09-27

Expiration Date


Abstract

A pharmaceutical composition for treating Gram negative bacteria-associated infections includes an antibacterial protein that includes at least one selected from the group of a protein having the amino acid sequence as set forth in SEQ ID NO: 1, a protein having the amino acid sequence as set forth in SEQ ID NO: 2, a protein having the amino acid sequence as set forth in SEQ ID NO: 3, a protein having the amino acid sequence as set forth in SEQ ID NO: 4, a protein having the amino acid sequence as set forth in SEQ ID NO: 5, a protein having the amino acid sequence as set forth in SEQ ID NO: 6, a protein having the amino acid sequence as set forth in SEQ ID NO: 7, and a protein having the amino acid sequence as set forth in SEQ ID NO: 8. A method of preparing the antibacterial protein is also disclosed.

Core Innovation

The document describes engineered antibacterial proteins (AP-1 to AP-8; SEQ ID NOs 1 to 8) that exhibit Gram-negative lytic activity. The engineered proteins are characterized as having enhanced outer-membrane penetration efficiency for Gram-negative bacteria including Acinetobacter baumannii, Pseudomonas aeruginosa, and Klebsiella pneumoniae, and are provided in pharmaceutical compositions for Gram-negative bacteria-associated infections.

The problem addressed is the treatment of Gram negative bacteria-associated infections using antibacterial proteins that can effectively lyse Gram-negative bacteria, including antibiotic-resistant strains. The document situates this problem within Gram-negative infections such as pneumonia, peritonitis, urinary tract infections, bloodstream infections, wound or surgical site infections, and meningitis. The disclosed engineered proteins are presented as achieving bacteriolysis against relevant Gram-negative targets.

The document also describes pharmaceutical compositions comprising an antibacterial protein defined by at least one of the amino acid sequences set forth in SEQ ID NOs 1 to 8. The compositions include formulation constraints such as protein concentration and pH, and may include excipients such as L-histidine and polysorbate/poloxamer and sorbitol or mannitol.

Experimental findings reported in the document include formulation stability assessment and antibacterial activity testing. The antibacterial activity is described as limited to the target Gram-negative species, with strong bacteriolysis against antibiotic-resistant strains including Meropenem-resistant Acinetobacter baumannii, and therapeutic efficacy in a mouse systemic infection model using AP-6, including improved survival and reduced observable responses versus control.

Claims Coverage

The provided dataset identifies two independent claims. The first independent claim covers a pharmaceutical composition for treating Gram negative bacteria-associated infections defined by antibacterial protein sequence membership (SEQ ID NOs 1 to 8). The second independent claim covers a method of preparing the antibacterial protein, linking specific antibacterial protein sequence membership (SEQ ID NOs 1 to 8) with culturing Escherichia coli cells carrying plasmid sequences (SEQ ID NOs 17 to 24) and subsequent inclusion-body recovery, solubilization, purifying, and refolding.

Antibacterial protein sequence-defined pharmaceutical composition

A pharmaceutical composition for treating Gram negative bacteria-associated infections comprising an antibacterial protein including at least one selected from a protein having the amino acid sequence as set forth in SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 7, or SEQ ID NO: 8.

Escherichia coli inclusion-body preparation with refolding of sequence-defined antibacterial protein

A method of preparing an antibacterial protein including at least one selected from a protein having the amino acid sequence as set forth in SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, SEQ ID NO: 6, SEQ ID NO: 7, or SEQ ID NO: 8 by culturing Escherichia coli cells including a plasmid that comprises a sequence as set forth in SEQ ID NO: 17, SEQ ID NO: 18, SEQ ID NO: 19, SEQ ID NO: 20, SEQ ID NO: 21, SEQ ID NO: 22, SEQ ID NO: 23, or SEQ ID NO: 24, inducing expression, recovering an inclusion body, solubilizing the inclusion body, purifying the antibacterial protein, and refolding the antibacterial protein.

Overall, the claim coverage centers on a Gram-negative infection treatment pharmaceutical composition defined by antibacterial protein amino acid sequence membership (SEQ ID NOs 1 to 8) and an antibacterial protein preparation workflow in which sequence-defined proteins are produced in Escherichia coli via plasmids containing sequences (SEQ ID NOs 17 to 24), then processed through inclusion-body recovery, solubilization, purifying, and refolding.

Stated Advantages

Enhanced outer-membrane penetration efficiency for Gram-negative bacteria.

Strong bacteriolysis against antibiotic-resistant strains, including Meropenem-resistant Acinetobacter baumannii.

Therapeutic efficacy in a mouse systemic infection model using AP-6, including improved survival and reduced observable responses versus control.

Documented Applications

Treating Gram negative bacteria-associated infections, including pneumonia, peritonitis, urinary tract infections, bloodstream infections, wound or surgical site infections, and meningitis.

Use of the engineered antibacterial proteins (including AP-6) in a mouse systemic infection model for therapeutic efficacy, with improved survival and reduced observable responses.

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