Bacteriophage compositions and methods of use thereof

Inventors

PAROS, MikeHONAKER, RyanHOBBS, Zachary AlanRICHTER, ManuelaMOKRES, LuciaKADIJA, Ermir

Assignees

Locus Biosciences Inc

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Publication Number

US-11311582-B2

Patent

Publication Date

2022-04-26

Expiration Date


Abstract

The present application provides bacteriophage compositions, and methods of treating or preventing bacterial infections using the bacteriophage compositions. The bacteriophage compositions can inhibit bacterial adhesion, invasion, and/or colonization in epithelial cells. The compositions and methods described herein are useful for treating or preventing mastitis in dairy cows.

Core Innovation

The patent describes bacteriophage compositions comprising at least two bacteriophage that target Gram-negative bacteria, together with a buffering agent, for treating or preventing a bacterial infection in an individual in need thereof. The bacteriophage are defined by genome sequence similarity, including bacteriophage having genome sequences having at least about 95% sequence identity to SEQ ID NO: 1, SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, and SEQ ID NO: 5.

The patent also describes administering a composition to inhibit bacteria adhesion, invasion, and/or colonization of epithelial cells of an individual in need thereof. In some embodiments, the target is narrowed to E. coli and embodiments include at least three or more bacteriophages.

Beyond in vivo treatment, the patent describes inhibiting bacteria growth in a target composition by contacting the target composition with an effective amount of a composition comprising at least two bacteriophage targeting Gram-negative bacteria and a buffering agent. In compositions described in the claims, the number of bacteriophages can be increased to at least four, and specific bacteriophage components p0031, p0032, p0033, and p0034 are included alongside the buffering agent.

Claims Coverage

The independent claims cover five main inventive areas. Across the independent claims, the central inventive features are the use of bacteriophage targeting Gram-negative bacteria with genome sequences having at least about 95% sequence identity to defined SEQ ID NOs, together with a buffering agent, minimum phage-count thresholds, and specific p0031/p0032/p0033/p0034 composition embodiments.

Treating or preventing bacterial infection using a multi-phage composition with buffering agent

A method of treating or preventing a bacterial infection in an individual in need thereof comprising administering an effective amount of a composition comprising at least two bacteriophage that target a Gram-negative bacteria selected from bacteriophage having genome sequence having at least about 95% sequence identity to SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, and SEQ ID NO: 1, and a buffering agent.

Inhibiting bacteria adhesion, invasion, and/or colonization of epithelial cells with a multi-phage composition with buffering agent

A method of inhibiting bacteria adhesion, invasion, and/or colonization of epithelial cells of an individual in need thereof comprising administering an effective amount of a composition comprising at least two bacteriophage that target a Gram-negative bacteria selected from bacteriophage having genome sequence having at least about 95% sequence identity to SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, and SEQ ID NO: 1, and a buffering agent.

Inhibiting bacteria growth by contacting a target composition with a multi-phage composition and buffering agent

A method of inhibiting bacteria growth in a target composition comprising contacting the target composition with an effective amount of a composition comprising at least two bacteriophage that target a Gram-negative bacteria selected from bacteriophage having genome sequence having at least about 95% sequence identity to SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, and SEQ ID NO: 1, and a buffering agent.

Composition with at least four specific Gram-negative targeting bacteriophage genomes and buffering agent

A composition comprising at least four bacteriophage that target a Gram-negative bacteria selected from bacteriophage having genome sequence having at least about 95% sequence identity to SEQ ID NO: 2, SEQ ID NO: 3, SEQ ID NO: 4, SEQ ID NO: 5, and SEQ ID NO: 1, and a buffering agent.

Composition containing p0031, p0032, p0033, and p0034 with buffering agent

A composition comprising at least four bacteriophage that target a Gram-negative bacteria, the composition comprising p0031, p0032, p0033, and p0034, and a buffering agent.

Across the independent claims, the coverage centers on compositions and methods that use multiple Gram-negative targeting bacteriophage defined by genome sequence identity at least about 95% to specified SEQ ID NOs together with a buffering agent. The claim set covers treating or preventing bacterial infection, inhibiting adhesion, invasion, and/or colonization of epithelial cells, inhibiting bacteria growth, and compositions requiring at least four bacteriophage, including a p0031/p0032/p0033/p0034 embodiment.

Stated Advantages

Not explicitly described in patent.

Documented Applications

Treating or preventing a bacterial infection in an individual in need thereof.

Inhibiting bacteria adhesion, invasion, and/or colonization of epithelial cells of an individual in need thereof.

Inhibiting bacteria growth in a target composition by contacting the target composition with an effective amount of a bacteriophage composition.

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