Thiazole derivatives useful as mutant IDH1 inhibitors for treating cancer

Inventors

Boxer, Matthew BrianWang, XiaodongBrimacombe, Kyle RyanDavis, Mindy Irene EmilyFang, YuhongHall, MatthewJadhav, AjitKaravadhi, SurendraLiu, LiMARTINEZ, NataliaMcIver, Andrew LouisPragani, RajanRohde, Jason MatthewSimeonov, AntonZhao, WeiShen, Min

Assignees

University of North Carolina at Chapel HillUS Department of Health and Human Services

Publication Number

US-10836759-B2

Publication Date

2020-11-17

Expiration Date

2037-06-21

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Abstract

A compound of Formula II or a pharmaceutically acceptable salt thereof, wherein CyN is a cyclic amine group bound via a nitrogen atom; X is C or N; R1 and R2 are each independently a halogen, CN, CF3, CHF2, CH2F, a C1-C10alkyl group, a C1-C10alkoxy group, a di(C1-C5alkyl)amino; m and n are each independently 1, 2, or 3, and represents either a single bond or a double bond, wherein the racemic mixture of 3-(4-(4-chlorophenyl)thiazol-2-yl)-1-(2-ethyl-5-methoxyphenyl)-6-(2-methylprop-1-en-1-yl)-5-(piperazine-1-carbonyl)pyridin-2(1H)-one atropisomers is excluded.

Core Innovation

The present disclosure provides compounds of Formula II or pharmaceutically acceptable salts thereof, which are characterized by a cyclic amine group bound via a nitrogen atom (CyN), and variable moieties such as X, R1, and R2 with defined substituents and bonding patterns. The compounds exclude the racemic mixture of a specific atropisomer detailed in the specification. These compounds are designed as inhibitors of mutant isocitrate dehydrogenase 1 (IDH1) enzymes that have gained the ability to catalyze the NADPH-dependent reduction of α-ketoglutarate to R-2-hydroxyglutarate (2HG). Pharmaceutical compositions containing these compounds are also disclosed along with methods of use.

The background identifies mutated IDH1, particularly IDH1(R132H), as a common enzyme mutation in a variety of cancers such as glioma, cholangiocarcinoma, chondrosarcoma, and acute myeloid leukemia. These mutations cause a gain-of-function, producing elevated 2HG, an oncometabolite that promotes hypermethylation of histones and inhibits cellular differentiation leading to cancer development. Targeting mutant IDH1 for inhibition addresses the problem of elevated 2HG in cancer cells, potentially reducing tumor progression. Mutant IDH1 inhibitors are expected to selectively affect mutant cancer cells with limited toxicity to normal cells.

This invention provides mutant IDH1 inhibitors that reduce 2HG levels and thus are useful therapeutics for treating cancers characterized by IDH1 mutations with neomorphic enzymatic activity. The methods include administering therapeutically effective amounts of Formula II compounds or salts to patients with cancers characterized by such mutations. The disclosure includes specific mutations like IDH1 R132H and R132C, and applies to a broad range of cancers including glioma, AML, sarcomas, lymphomas, lung cancer, cholangiocarcinoma, and colon cancer, as well as disorders such as Ollier disease and Maffucci syndrome.

Claims Coverage

This patent includes sixteen inventive features primarily covering compound compositions, specific stereoisomers, pharmaceutical formulations, and therapeutic methods targeting mutant IDH1-associated cancers.

Compound of Formula II

A compound defined by Formula II with specific structural features including a cyclic amine group (CyN) bound via nitrogen, substituents R1 and R2 selected independently from halogen, CN, CF3, CHF2, CH2F, C1-C10 alkyl or alkoxy groups, and the exclusion of a specific racemic atropisomer.

Atropisomer compounds of Formula II-A to II-D

Specific atropisomeric forms (Formulas II-A, II-B, II-C, II-D) of the Formula II compound wherein at least one R1 group is an ortho substituent and the atropisomers are present in excess over their enantiomers, including being substantially free of corresponding enantiomers.

Substituent specificity on R2 and bond X

Compounds where m is 1 and R2 is a 4-position substituent selected from 4-Cl, 4-CF3, 4-CHF2, 4-CH3O, or 4-CN, with X being C or N with specified combinations with R2 substituents.

Substituent specificity on R1 and n

Compounds where n is 2 and R1 has specified substituent patterns, such as 2-ethyl and 5-methoxy or other combinations including chloro or alkoxy groups.

Definition of the cyclic amine group (CyN)

CyN is defined as a cyclic amine group bound via nitrogen optionally substituted with halogen, C1-C2 alkyl, or C1-C2 alkoxy, including specific structural definitions as seen in provided exemplary compounds.

Pharmaceutical composition

A pharmaceutical composition comprising a compound or salt of Formula II with a pharmaceutically acceptable carrier.

Method of treating IDH1-mutant cancer

A method of treating cancers characterized by the presence of an IDH1 mutation that results in NADPH-dependent reduction of α-ketoglutarate to R(−)-2-hydroxyglutarate, by administering the compound or salt of Formula II.

Mutation subtype specificity

The method of treatment targeting patients with IDH1 R132H or R132C mutations.

Cancer type specificity in treatment

Treatment methods specific to cancers including glioma (glioblastoma), acute myelogenous leukemia, myelodysplastic/myeloproliferative neoplasms, sarcoma, chronic myelomonocytic leukemia, non-Hodgkin lymphoma, melanoma, non-small cell lung cancer, cholangiocarcinomas, chondrosarcoma, or colon cancer.

Treatment of Ollier disease or Maffucci syndrome

A method of treating Ollier disease or Maffucci syndrome by administering the compound or salt of Formula II.

Combination therapy treatment methods

Methods of treating cancer comprising administration of a compound or salt of Formula II in combination with at least one additional therapeutic agent.

The claims cover the novel compounds defined by Formula II, including specific atropisomeric forms, their pharmaceutical compositions, and methods of treating cancers and related diseases characterized by mutant IDH1 enzyme activity. The inventive features include structural definitions of the compounds, their stereochemical forms, therapeutic uses against specific mutations and cancer types, and methods of combination therapy.

Stated Advantages

Inhibition of mutant IDH1 reduces levels of the oncometabolite 2HG, which is expected to result in fewer undifferentiated cancer cells.

Selective inhibition of mutant IDH1 is expected to have little effect on non-cancerous cells, leading to lower toxicity compared to typical cytotoxic anticancer agents.

Documented Applications

Treatment of cancers characterized by mutant IDH1 including glioma (glioblastoma), acute myelogenous leukemia, myelodysplastic/myeloproliferative neoplasms, sarcoma, chronic myelomonocytic leukemia, non-Hodgkin lymphoma, astrocytoma, melanoma, non-small cell lung cancer, cholangiocarcinomas, chondrosarcoma, and colon cancer.

Treatment of Ollier disease and Maffucci syndrome, disorders that cause enchondromas.

Use in veterinary applications to treat cancers in non-human mammals such as companion animals and livestock.

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