SoftGenetics
Provider of Windows-based genetic analysis software for research, clinical and forensic use. Offers desktop and server software for short- and long-read sequencing analysis, Sanger trace analysis, STR/fragment profiling, mitochondrial analysis, probabilistic genotyping, chimerism monitoring, variant interpretation with annotation/knowledge‑base features, plus documentation, training and global ordering/distribution support.
Industries
Nr. of Employees
small (1-50)
SoftGenetics
100 Oakwood Ave, Suite 350, State College, PA 16803, USA
Patents
Products
Short-read NGS analysis software
Desktop software for short-read sequencing analysis supporting variant calling, structural variant detection, CNV, RNA‑Seq and other NGS applications with GUI and multiple analysis modules.
Long-read sequencing analysis software
Software for analysis of long-read sequencing platform output with homopolymer-aware alignment, SNV/indel calling, structural variation and STR expansion analysis.
Variant interpretation workbench
Interpretation workbench for NGS variant annotation, knowledge-base development, coverage monitoring and customizable reporting that imports BAM/VCF and links external annotation sources.
Sanger sequencing trace analysis software
Trace-based variant analysis tools for Sanger sequencing including anti-correlation trace comparison, heterozygous indel handling, methylation and mtDNA analysis with batch processing support.
Genotype and fragment analysis software
Genotyping and fragment analysis for capillary electrophoresis datasets with application-specific modules, panel customization and support for high-throughput CE workflows.
Forensic STR expert system and HID workflows
Expert-system support for human identification workflows including database searching, kinship and paternity analysis, contamination checks and export to forensic index system formats.
Short-read NGS analysis software
Desktop software for short-read sequencing analysis supporting variant calling, structural variant detection, CNV, RNA‑Seq and other NGS applications with GUI and multiple analysis modules.
Long-read sequencing analysis software
Software for analysis of long-read sequencing platform output with homopolymer-aware alignment, SNV/indel calling, structural variation and STR expansion analysis.
Variant interpretation workbench
Interpretation workbench for NGS variant annotation, knowledge-base development, coverage monitoring and customizable reporting that imports BAM/VCF and links external annotation sources.
Sanger sequencing trace analysis software
Trace-based variant analysis tools for Sanger sequencing including anti-correlation trace comparison, heterozygous indel handling, methylation and mtDNA analysis with batch processing support.
Genotype and fragment analysis software
Genotyping and fragment analysis for capillary electrophoresis datasets with application-specific modules, panel customization and support for high-throughput CE workflows.
Forensic STR expert system and HID workflows
Expert-system support for human identification workflows including database searching, kinship and paternity analysis, contamination checks and export to forensic index system formats.
Services
35-day free trial downloads for desktop and server trial programs; downloadable user manuals and quick-start guides to support evaluation.
Recorded and live webinars, online training courses, educational licensing and technical support for installation, validation and operationalization of software.
Technical support for software installation and activations, validation assistance and published application notes to support laboratory adoption and verification.
35-day free trial downloads for desktop and server trial programs; downloadable user manuals and quick-start guides to support evaluation.
Recorded and live webinars, online training courses, educational licensing and technical support for installation, validation and operationalization of software.
Technical support for software installation and activations, validation assistance and published application notes to support laboratory adoption and verification.
Expertise Areas
- Short- and long-read sequencing data analysis
- Sanger trace analysis and variant discovery
- Forensic genotyping and STR analysis
- Probabilistic genotyping and mixture interpretation
Key Technologies
- Next-generation sequencing (short-read) analysis
- Long-read sequencing analysis
- Sanger trace analysis
- Capillary electrophoresis fragment/STR analysis