Ocimum Biosolutions
Provider of laboratory informatics, bioinformatics and genomics laboratory services. Offers sample-centric LIMS and core-facility management software, sequence- and microarray-analysis software, curated gene expression reference datasets, predictive toxicogenomics models, and laboratory services including sequencing, genotyping, qRT-PCR, nucleic acid purification and microarray production. Supports on-premise and web/SaaS deployments, instrument integration via APIs, GLP workflows and regulated data handling.
Industries
Nr. of Employees
large (251-1000)
Products
Sample-centric LIMS for biobanking and repositories
Web-based system for biospecimen lifecycle management including consent, storage, retrieval, freezer interfacing, temperature monitoring and chain-of-custody features.
LIMS for genomics and sequencing workflows
LIMS tailored for genotyping, expression and sequencing workflows with instrument interfacing, plate management, sequencing file capture and NGS-specific reporting.
Sequence analysis and experiment management software
Desktop and server-capable sequence analysis suite offering BLAST management, contig assembly, chromatogram editing, alignment, primer/probe design and annotation storage.
Microarray expression analysis software
Expression-analysis platform for importing microarray data, normalization, clustering, classification, functional annotation and pathway analysis with workflow automation.
Predictive toxicogenomics analysis platform
Web- or server-deployable predictive toxicogenomics models and workflows to screen and rank compounds against reference toxicity signatures and generate assessment reports.
Custom oligonucleotide microarrays and catalog arrays
Design and manufacture of oligonucleotide microarrays from catalog gene lists to fully custom content, with oligo synthesis, purification and batch QC.
Sample-centric LIMS for biobanking and repositories
Web-based system for biospecimen lifecycle management including consent, storage, retrieval, freezer interfacing, temperature monitoring and chain-of-custody features.
LIMS for genomics and sequencing workflows
LIMS tailored for genotyping, expression and sequencing workflows with instrument interfacing, plate management, sequencing file capture and NGS-specific reporting.
Sequence analysis and experiment management software
Desktop and server-capable sequence analysis suite offering BLAST management, contig assembly, chromatogram editing, alignment, primer/probe design and annotation storage.
Microarray expression analysis software
Expression-analysis platform for importing microarray data, normalization, clustering, classification, functional annotation and pathway analysis with workflow automation.
Predictive toxicogenomics analysis platform
Web- or server-deployable predictive toxicogenomics models and workflows to screen and rank compounds against reference toxicity signatures and generate assessment reports.
Custom oligonucleotide microarrays and catalog arrays
Design and manufacture of oligonucleotide microarrays from catalog gene lists to fully custom content, with oligo synthesis, purification and batch QC.
Services
Gene and microRNA expression profiling, SNP genotyping, copy number analysis, sequencing and assay development operated under GLP conditions with data management and analysis support.
Assay design, sample preparation, RT-PCR execution using probe- or dye-based chemistries, and quantitative data analysis including relative and absolute quantitation.
Sanger capillary and high-throughput sequencing services including primer design, base calling, assembly, SNP/indel detection and sequence annotation for diverse sample types.
DNA and RNA extraction from a wide variety of sample types, protocol optimization for limited/compromised samples and stepwise QC reporting delivered in client-preferred formats.
Array-based genotyping and CNV detection services including fine mapping, individual assays and whole genome amplification for low-input samples plus downstream bioinformatics.
Gene and microRNA expression profiling, SNP genotyping, copy number analysis, sequencing and assay development operated under GLP conditions with data management and analysis support.
Assay design, sample preparation, RT-PCR execution using probe- or dye-based chemistries, and quantitative data analysis including relative and absolute quantitation.
Sanger capillary and high-throughput sequencing services including primer design, base calling, assembly, SNP/indel detection and sequence annotation for diverse sample types.
DNA and RNA extraction from a wide variety of sample types, protocol optimization for limited/compromised samples and stepwise QC reporting delivered in client-preferred formats.
Array-based genotyping and CNV detection services including fine mapping, individual assays and whole genome amplification for low-input samples plus downstream bioinformatics.
Expertise Areas
- Laboratory informatics (LIMS) development and deployment
- Genomics and sequencing services
- Microarray design, production and expression analysis
- Sequence analysis, assembly and annotation
Key Technologies
- LIMS and laboratory workflow automation
- Microarray design and production (oligonucleotide arrays)
- Microarray raw data formats and preprocessing (e.g., CEL/CHP equivalents)
- Microarray normalization and statistical methods (RMA, PLIER, MAS-like algorithms)