GenomSys
GenomSys is a Swiss health software company dedicated to advancing genomics and precision medicine through innovative digital applications. The company develops solutions based on the ISO/IEC 23092 MPEG-G standard for genomic data, supporting labs and individuals in managing and analyzing genomic information securely and efficiently. With a focus on interoperability, security, scalability, and privacy, GenomSys aims to transform how genomic data is stored, processed, shared, and protected, enabling personalized medicine and improving healthcare outcomes globally.
Industries
Nr. of Employees
small (1-50)
GenomSys
Fondation EPFL Innovation Park, batiment C n.1015 Lieu LAUSANNE (CH)
Patents
Method and apparatus for the access to bioinformatics data structured in access units
US-11763918-B2
View Details
Method and apparatus for the access to bioinformatics data structured in access units
US-11763918-B2
View DetailsProducts
Genomic format conversion and toolkit (CE-marked components)
Software utilities to convert standard sequencing outputs (e.g., FASTQ) into ISO/IEC 23092-compliant compressed containers and to perform compression, packaging and format management.
Cloud-native secondary analysis platform (format-native)
Cloud platform providing secondary analysis for germline sequencing that processes compressed-format inputs directly and integrates with instrument data flows and downstream interpretation tools.
Variant analysis software for clinical diagnostics (IVD component)
Software pipeline for germline variant calling, annotation and interpretation designed to operate directly on compressed genomic containers and intended for hereditary disease diagnostics.
NGS-based blood group genotyping software
Software for high-throughput blood group typing using NGS data, covering multiple blood group systems and suited for transfusion and immunogenetics laboratories.
Mobile personal genomics application
Mobile application that stores compressed genomic datasets on-device and provides user-controlled access and request workflows for additional analyses.
Genomic format conversion and toolkit (CE-marked components)
Software utilities to convert standard sequencing outputs (e.g., FASTQ) into ISO/IEC 23092-compliant compressed containers and to perform compression, packaging and format management.
Cloud-native secondary analysis platform (format-native)
Cloud platform providing secondary analysis for germline sequencing that processes compressed-format inputs directly and integrates with instrument data flows and downstream interpretation tools.
Variant analysis software for clinical diagnostics (IVD component)
Software pipeline for germline variant calling, annotation and interpretation designed to operate directly on compressed genomic containers and intended for hereditary disease diagnostics.
NGS-based blood group genotyping software
Software for high-throughput blood group typing using NGS data, covering multiple blood group systems and suited for transfusion and immunogenetics laboratories.
Mobile personal genomics application
Mobile application that stores compressed genomic datasets on-device and provides user-controlled access and request workflows for additional analyses.
Services
Technical support and tooling to implement ISO/IEC 23092-based data representation, compression and storage within laboratory and platform workflows.
Deployment and integration of cloud-native secondary analysis pipelines that operate natively on compressed genomic containers and interface with tertiary interpretation tools.
Design and implementation of metadata and linkage schemes to connect genomic datasets with electronic health records and clinical repositories to preserve clinical context during exchange.
Management and technical participation in multi-party R&D projects to validate and deploy genomic data standards and integrate them into analysis pipelines and use cases.
Technical support and tooling to implement ISO/IEC 23092-based data representation, compression and storage within laboratory and platform workflows.
Deployment and integration of cloud-native secondary analysis pipelines that operate natively on compressed genomic containers and interface with tertiary interpretation tools.
Design and implementation of metadata and linkage schemes to connect genomic datasets with electronic health records and clinical repositories to preserve clinical context during exchange.
Management and technical participation in multi-party R&D projects to validate and deploy genomic data standards and integrate them into analysis pipelines and use cases.
Expertise Areas
- Clinical genomics diagnostics (germline and somatic)
- Bioinformatics for NGS secondary and tertiary analysis
- Genomic data standards and interoperability (ISO/IEC 23092)
- Genomic data compression and storage optimization
Key Technologies
- ISO/IEC 23092 (MPEG-G) genomic data standard
- Next-generation sequencing (NGS)
- Whole-exome sequencing (WES)
- Whole-genome sequencing (WGS)
News & Updates
A study by ALTEMS shows that integrating genomic testing like Oncotype DX into routine care for early-stage hormone-responsive breast cancer patients results in a 57% reduction in healthcare and social costs, mainly by avoiding unnecessary chemotherapy.
Genetic variants indicate that repurposed medicines might help in the treatment of severely ill COVID-19 patients, highlighting the importance of standardized, efficient, and secure genomic data formats like MPEG-G.
Led and contributed to the creation of the only ISO standard for genomic data, enabling interoperability and innovation in genomic data storage and processing.
A study by ALTEMS shows that integrating genomic testing like Oncotype DX into routine care for early-stage hormone-responsive breast cancer patients results in a 57% reduction in healthcare and social costs, mainly by avoiding unnecessary chemotherapy.
Genetic variants indicate that repurposed medicines might help in the treatment of severely ill COVID-19 patients, highlighting the importance of standardized, efficient, and secure genomic data formats like MPEG-G.
Led and contributed to the creation of the only ISO standard for genomic data, enabling interoperability and innovation in genomic data storage and processing.