BioBam Bioinformatics
BioBam is a leading bioinformatics solution provider committed to developing user-friendly software solutions for biological research. Their mission is to transform complex data analysis procedures into attractive and interactive tasks, bridging the gap between experimental work, bioinformatics analysis, and applied research. Their flagship product, OmicsBox, offers an all-in-one analysis platform used by top private and public research institutions worldwide, supporting disciplines such as agricultural genomics, microbiology, and environmental NGS studies. BioBam emphasizes innovation, collaboration, and making genomic research accessible to all, with a global community of over 900 institutions and more than 4,000 users. The company actively participates in scientific conferences such as PAG, showcasing new features and engaging with the genomics community.
Industries
Nr. of Employees
small (1-50)
BioBam Bioinformatics
Carrer de la Innovació, 15, Valencia, Spain
Products
Desktop bioinformatics analysis platform
All-in-one desktop software for processing, visualization and interpretation of genomic, transcriptomic and metagenomic datasets across Windows, Linux and Mac.
Command-line functional annotation suite
Standalone command-line suite to automate functional annotation and reporting on servers and clusters, designed for high-performance and reproducible execution.
Cloud FASTA uploader for sequencing platforms
Utility to upload FASTA files into external sequencing cloud projects to facilitate downstream analyses and cloud-based computation triggers.
Cloud-based high-throughput sequence alignment service
Cloud-backed alignment service to perform large-scale BLAST searches with consumption-based compute pricing for very large sequence sets.
Desktop bioinformatics analysis platform
All-in-one desktop software for processing, visualization and interpretation of genomic, transcriptomic and metagenomic datasets across Windows, Linux and Mac.
Command-line functional annotation suite
Standalone command-line suite to automate functional annotation and reporting on servers and clusters, designed for high-performance and reproducible execution.
Cloud FASTA uploader for sequencing platforms
Utility to upload FASTA files into external sequencing cloud projects to facilitate downstream analyses and cloud-based computation triggers.
Cloud-based high-throughput sequence alignment service
Cloud-backed alignment service to perform large-scale BLAST searches with consumption-based compute pricing for very large sequence sets.
Services
Cloud-based compute services to run high-throughput alignment and domain-search tasks and other compute-intensive analyses on scalable infrastructure.
Subscription and perpetual licensing options for desktop and command-line software, plus technical support, documentation and training resources.
Provisioning, configuration and licensing of command-line functional annotation tools for integration into existing pipelines and secure on-premise execution.
Cloud-based compute services to run high-throughput alignment and domain-search tasks and other compute-intensive analyses on scalable infrastructure.
Subscription and perpetual licensing options for desktop and command-line software, plus technical support, documentation and training resources.
Provisioning, configuration and licensing of command-line functional annotation tools for integration into existing pipelines and secure on-premise execution.
Expertise Areas
- End-to-end NGS data analysis for genomes, transcriptomes and metagenomes
- Functional annotation and enrichment analysis
- Transcriptomics (RNA-Seq) analysis, QC and differential expression
- Long-read transcriptomics and reference-free reconstruction
Key Technologies
- Next-generation sequencing (NGS) analysis pipelines
- Long-read sequencing analysis
- Sequence alignment (BLAST) at scale
- InterProScan domain and signature annotation
News & Updates
Fabian Jetzinger, a PhD student at BioBam, contributed to the organization of the LongTREC summer school, which focused on bioinformatic analyses of long-read transcriptomics data.
BioBam received a grant from the Valencian Innovation Agency for their project on high-performance computing and massive sequencing data processing.
BioBam participated in the 21st European Conference on Computational Biology, engaging in discussions on planetary health and biodiversity.
Details about BioBam’s involvement in the LongTREC summer school, focusing on long-read transcriptomics.
An article explaining the differences between two common functional enrichment analysis methods.
Discusses the advantages of long-read sequencing technologies in transcriptomics.
Fabian Jetzinger, a PhD student at BioBam, contributed to the organization of the LongTREC summer school, which focused on bioinformatic analyses of long-read transcriptomics data.
BioBam received a grant from the Valencian Innovation Agency for their project on high-performance computing and massive sequencing data processing.
BioBam participated in the 21st European Conference on Computational Biology, engaging in discussions on planetary health and biodiversity.
Details about BioBam’s involvement in the LongTREC summer school, focusing on long-read transcriptomics.
An article explaining the differences between two common functional enrichment analysis methods.
Discusses the advantages of long-read sequencing technologies in transcriptomics.